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Portrai Insights

Insights on data analysis, AI, and the platform we're building at Portrai.

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Portrai Insight

Comprehensive PortrAIgent Visium Analysis

This six-part series demonstrates an end-to-end spatial transcriptomics workflow using the PortrAIgent platform to analyze TNBC and ER+ breast cancer tissues by integrating Visium data with a…

POPortrai-
Journal articles

Engineering and evaluation of precision-glycosylated clickable albumin nanoplatform for targeting the tumor microenvironment

Glycosylation of drug delivery vehicles enables selective tumor microenvironment (TME) targeting but is…

POPortrai-
AACR

Development of human antibodies targeting a novel cancer-associated fibroblast protein identified from spatial transcriptomics

Cancer-associated fibroblasts (CAFs) are key components of the tumor microenvironment and play a critical role in tumor progression and therapy resistance. Recent advances in spatial transcriptomics..

POPortrai-
AACR

High-resolution AI-based spatial biology tool for lung cancer trained by image-based spatial transcriptomics data to analyze tumor microenvironmnet

Spatial biology enables the analysis of tumor microenvironments by revealing cellular relationships within the heterogeneous tumor landscape, which are closely associated with tumor characteristics...

POPortrai-
AACR

Biologically informed cell typing in the tumor microenvironment with lightweight LLMs

The tumor microenvironment (TME) is a complex ecosystem of diverse cell types that interact dynamically, influencing tumor development and therapy response. Accurate cell type annotation in the TME...

POPortrai-
AACR

Estimation of homologous recombination deficiency map from spatial transcriptomics

Homologous recombination deficiency (HRD) is a predictive biomarker for various anti-cancer drugs such as poly(ADP-ribose) polymerase inhibitors (PARPi) and platinum-based chemotherapeutic agents...

POPortrai-
Journal articles

Generation of Super-resolution Images from Barcode-based Spatial Transcriptomics Using Deep Image Prior

Spatial transcriptomics (ST) has revolutionized the field of biology by providing a powerful tool for analyzing gene expression in situ.

POPortrai-
Journal articles

Spatial transcriptomics unveils landscape of resistance to concurrent chemo-radiotherapy in hypopharyngeal squamous cell carcinoma: the role of SPP1+ macrophages

Hypopharyngeal squamous cell carcinoma (SCC) is a highly aggressive cancer with a poor prognosis, particularly in advanced stages where…

POPortrai-
Journal articles

Analysis of Unmapped RNA-seq Data from Cancer Spatial Transcriptome to Decipher Cancer Microbiome

Recent research increasingly emphasizes the importance of the microbiome in the development and progression of cancer.

POPortrai-

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