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Portrai Insights

Insights on data analysis, AI, and the platform we're building at Portrai.

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91 articles
AACR

Peptide-based theranostics targeting ANTXR1 in cancer stroma Available

ANTXR1 is one of the pancreatic ductal adenocarcinoma (PDAC) stroma-specific cell surface markers (Ref 1), which is also overexpressed in the stroma of various cancer types. Radiotheranostics refers..

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Journal articles

Mapping cell types in the tumor microenvironment from tissue images via deep learning trained by spatial transcriptomics of lung adenocarcinoma

Profiling heterogeneous cell types in the tumor microenvironment (TME) is important for cancer immunotherapy.

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Journal articles

GeneDART: Extending gene coverage in image-based spatial transcriptomics by deep learning-based domain adaptation with barcode-based RNA-sequencing data

Spatial transcriptomics (ST) technologies provide comprehensive biological insights regarding cell-cell interactions and peri-cellular…

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Journal articles

STopover captures spatial colocalization and interaction in the tumor microenvironment using topological analysis in spatial transcriptomics data

Unraveling the spatial configuration of the tumor microenvironment (TME) is key to understanding tumor-immune interactions to translate them…

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AACR

Discovery of stromal targets in pancreatic cancer Available

Pancreatic ductal adenocarcinoma (PDAC) is one of the most lethal malignancies with limited treatment options. Development of stroma targeting therapeutics for PDAC is gaining attention because…

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AACR

Deep learning-based tumor microenvironment cell types mapping from H&E images of lung adenocarcinoma using spatial transcriptomic data

Spatial characterization of cell types of the tumor microenvironment (TME) is a key to finding new targets as well as developing biomarkers for immuno-oncology treatment.

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Journal articles

Spatial Transcriptomics-based Identification of Molecular Markers for Nanomedicine Distribution in Tumor Tissue

The intratumoral accumulation of nanomedicine has been considered a passive process, referred to as the enhanced permeability and retention…

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Journal articles

CellDART: cell type inference by domain adaptation of single-cell and spatial transcriptomic data

Deciphering the cellular composition in genome-wide spatially resolved transcriptomic data is a critical task to clarify the spatial context of cells in a…

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Journal articles

Alzheimer’s Disease Neuroimaging Initiative. Hippocampal glucose uptake as a surrogate of metabolic change of microglia in Alzheimer’s disease

Dynamically altered microglia play an important role in the progression of Alzheimer’s disease (AD).

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